CDS

Accession Number TCMCG007C12926
gbkey CDS
Protein Id XP_009127685.1
Location join(10658641..10658733,10658880..10658996,10659283..10659384,10659620..10659676,10659811..10659879,10660150..10660254,10660327..10660521,10660638..10660736,10660834..10661397,10661714..10661938,10662039..10662338,10662641..10662708,10662832..10662990,10663261..10663386,10663468..10663599,10663674..10663785,10663932..10664087,10664312..10664551,10664743..10664910,10665024..10665167,10665430..10665891,10666002..10666289,10666371..10666528,10666627..10666734,10666815..10667109)
Gene LOC103852540
GeneID 103852540
Organism Brassica rapa

Protein

Length 1513aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009129437.3
Definition protein PHYLLO, chloroplastic isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category E
Description Protein PHYLLO, chloroplastic
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01717        [VIEW IN KEGG]
R04031        [VIEW IN KEGG]
R08165        [VIEW IN KEGG]
R08166        [VIEW IN KEGG]
KEGG_rclass RC00588        [VIEW IN KEGG]
RC01053        [VIEW IN KEGG]
RC02148        [VIEW IN KEGG]
RC02186        [VIEW IN KEGG]
RC02475        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K14759        [VIEW IN KEGG]
EC 2.2.1.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.113        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.99.20        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
5.4.4.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00130        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00130        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0006732        [VIEW IN EMBL-EBI]
GO:0006766        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009110        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010109        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0042180        [VIEW IN EMBL-EBI]
GO:0042181        [VIEW IN EMBL-EBI]
GO:0042372        [VIEW IN EMBL-EBI]
GO:0042374        [VIEW IN EMBL-EBI]
GO:0042548        [VIEW IN EMBL-EBI]
GO:0042550        [VIEW IN EMBL-EBI]
GO:0043467        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901661        [VIEW IN EMBL-EBI]
GO:1901663        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGACGGCCTATGGTTTTCCAGATATTGATTTCAACGGAAACTCTAGTGTATATAGCAAGGATGGCTCTTCTTACTTCTTCGTTCCTCAGGTCGAGTTAGATGAGCACGAGGAGGTCTCCATATTAGCAGTTACCCTGGCATGGAATGATTCTCTATCCTATAGTTTTGAGCAAGCAATTAGTTCATATGAGAAATCAATTTTTCAGGTTTCTTGTCATGTCTGCCCCAATTTAGAGGAGCATTGGTTTAAAAATCTAAAAAGTTCTCTTGCAAAGTTGGATGTAAAAGAGATTCATCCAATTAAGATGGAGCATATGGAGTATTTAACATTTTCTGGGAGAGATCAGGGTGACGCCAAGGAACTGAAAAATATACAACCATTATGTCAGTTCCACTGCAAGCTTTCACCTGACGTTGTTTTCTCAAACAACATGCTGAATCAGGAGGCTGAAGTGAGCAACTCCTTGAAAGATCAGGCTAATATCAATGCTGTATGGGCATCAGCTATAATTGAAGAATGCACTCGTCTTGGTTTGACGTACTTTTGTGTAGCTCCTGGATCAAGATCCTCCCATCTTGCAATTGCTGCTGCCAACCACCCCCTTACAACGTGTCTTGCATGCTATGACGAACGATCTCTTGCATTTCACGCTATTGGGTATGCTAAAGGATCCCTTAAACCGGCTGTCATTATAACATCATCAGGAACCGCCGTTTCAAATCTTCTTCCAGCGGTGGTTGAAGCCAGTGAGGATTTCTTGCCTCTGCTACTACTTACTGCAGATCGTCCTCCTGAACTTCAGGGAGTGGGCGCAAATCAAGCTATAAATCAAATAAACCACTTTGGTTCGTTTGTCAGATTCTTCTTCAATCTTCCTCCTCCAACTGATCTTATACCAGTCCGGATGGTCCTTACTACTATAGACTCTGCTCTACATTGGGCAACAGGTTCTGCTTGTGGACCAGTACATATGAATTGTCCTTTTAGAGACCCACTTGACGGTAGTCCAACAAATTGGTCATTCAACTGCTTAAATGGATTAGACATGTGGATGTCCAATTCTGAACCATTCACAAAATATTTTCAAGTTCAAAGCCTCAAGAGCAATGGTGAAACAACTGGCCAAATTACTGAGGTCTTACAAGTAATCAAAGAGGCTAAGAAGGGTCTTCTTCTTATCGGTGCAATCCATACGGAGGATGAAATTTGGGCTTCTCTTCTGTTGGCTAAAGAACTGATGTGGCCGGTTGTTGCAGATGTCTTGTCTGGTGTACGGCTGCGCAAGCTGTCTAAGCCTTTTCTTGAGAAGTGGACCCCTATTTTTGTTGATCATCTTGATCATGCCCTGCTTTCAGATTCTGTTAAGAATTTGATTGAGTTTGATGTTGTTATCCAGGTTGGAAGTCGGATAACAAGTAAAAGAGTTTCTCAGGTGCTAGAGAAATGCTTTCCATTTGCATACATTTTGGTTGATAAGCATCCATGCCGACATGATCCATCACACTTGGTCACTCACAGGGTCCAAAGCAATATCGTTCAGTTTGCTGATTGCGTGCTTAAATCTCGATTTCCATGGAGGAGAAGCAAATTGCATGGTCATTTACATGCATTGGATGGCGCAATTGCCCGCGAAATGTCATTTCAATTATCTGCTGAGTGCTCCCTGACCGAACCTTATGTGGCACATATGCTTTCCAAAGCATTGACTTCCAAATCTGCTCTTTTCATCGGAAATAGTATGCCAATAAGGGATGTGGATATGTATGGATGTAGTTCGGGAAATTATTCGCACGTGGTAGATATGATGTTAAGTGCAGAACTGCCATCTCAATGGATACAAGTAACTGGAAATAGAGGAGCTAGTGGCATTGATGGCTTGCTCAGCTCCGCCACTGGCTTTGCTGTAGGGTGCAAGAAGAGAGTTGTCTGTGTGGTGGGAGACGTCTCTTTCCTTCATGATACAAATGGATTGGCGATTTTGAAGCAGAGGACTGCGAGGAAAGCAATGACAGTTCTCGTGATAAATAACCGTGGAGGTGGAATCTTCCGACTTCTTCCTATAGCAAAGAGAACAGAGCCTAGCGTGTTGAATCAATATTTCTATACATCACATGACATTTCCATAGAAAACTTGTGTTTGGCACATGGTGTGAAGTATGTACACGTTGGGACAAAAAGGGAACTTGAGGAAACTCTATTGGAACCCAGCGTTGAAGAGATGGATTGCATTGTGGAGGTTGAAAGCTCTATTGATGCTAACGCGATCGTTCATAGTACTTTGGAGAGTTTTGCACGCCAAGCTGCAAATAATTCCTTGGGCATTATCTCGGCCAGTTCTGTTCTTCATCCAATGATCGACAGTGTACTTCTTTTCCAAGTCTCTGGAATACAATATTCGCGGTACAGAGTCGGACTGTGCGACAGACCTACCATATATTCTGGTGAATCCTCTCAATTCCATAGAGAAGGGTTCATACTCTCCCTTACTTTGGAGGATGGAAGCATTGGCTGCGGAGAGGTTGCACCTTTGGACAGTAGTAGGGAGAACTTAATGGATGTTGAGGGGCAGCTACAGTTGATTCTTCACCTTATGAAAGGAGCTAAAGTCAGTCACATGCTTCCTTTGTTAAATGGCTCGTTTTCTTCCTGGATTTGGAGTGAACTTGGAATCACTGCATCATCAGTTTTCCCAAGTGTCAGATGTGGTCTGGAAATGGCTCTTCTGAATGCAATGGCAGTAAAACATGATTCTGGTTTAATGGGGATACTTCATTGTCAGAAAGAAGAAAATGGTTCTGCTCAGCCACACTCTGTTCCAATATGTGCCCTTCTTGATTCTGAAGGTACTCCATCAGAGGTCGCATACGTTGCTAGAAAACTTGTTGAAGAAGGGTTCAGTGCTATTAAACTTAAAGTTGCTCGTCGAGTGAACTCCGTTCAAGATGCTTTAGTTCTGCAAGAAGTAAGGAGACTAGTTGGCGATCAAATTGAACTCCGTGTAGATGCTAATTGTCGCTGGACTTTTGAAGAGGCTATAACGTTTGGTTTATTGGTGAAAAAATGCAATCTACAGTATATTGAGGAACCTGTCCAGAATAAAGACGATCTTATAAGGTTTTGTGAAGAAAGTGGATTACCAGTAGCACTTGATGAGACTCTTGATGATTTTAAGGAATGTCCCTTGCGCATGCTTGCCAAATATACCCATCCTGGAGTAGTTGCTGTTGTTATTAAACCAAGTGTTGTCGGAGGGTTTGAGATTGCAGCACTGATTGCTCGCTGGGCACAGCAGCATGGAAAGATGGCTGTTATAAGTGCCGCATATGAAAGTGGCCTAGGTTTGTCAGCATATATTTTGTTTGCATCATATTTGGAGACGGAGAACGTCAAAACATTTAGAGAGAGAAAGCAAGGAATGGCCCCTCTTGTGGCTCATGGTCTTGGAACCTACAAATGGCTTAATGAAGACGTAATGATGAATAGTTTAGGGATATCTCGTAGTCCGTACAGTGGATTTATCGAAGGATCTGTTGCTGATGCTAGCAAAAATCTAAAGGATGTTAACATAAACAACGATGTTATTGTAAGAACCAGCATAGGAGTTCTCGTCCGGAGGTGTGAACTGAGGGTGGACGTAGGTGGTTTCTCTCATTTTGTAAGAATCCACGAGGTTGGGCAGAATGTAGAAGGAAGTGTAGTTATGTTTCTTCATGGGTTTCTTGGAACTGGTGAAGAATGGATCCCCATCATGAAGGGTATCTCGGGATCTGCAAGATGCATTTCAGTTGATATCCCTGGTCATGGAAGCTCAAGGGTACAGAGTAATGCTAGTGAGACCCCAACTTTCTCAATGGAGATGATAGCGGAAGCACTGTATAAATTGATTGAGCAAATTACTCCTGGCAAAGTTACCATAGTTGGATATTCCATGGGAGCAAGAATAGCACTGTACATGGCTTTGAGATTTAGCAACAAGATCGAAGGCGCTGTTGTGGTATCGGGGAGCCCCGGGATCAAGGATCCAGTGGCAAGGAAAGTTCGAAGTGCAACAGATGATTCTAAAGCACGAATGATGGTTGACCATGGACTAGAAATCTTTGTGGAGAACTGGTACAATGGAGGCTTGTGGAAAAGTTTCAGAAGTCACCCCCATTTCAGAAAAATAGTTGCAAGCCGCTTGGTACATGATGATGTCCTTAGTGTTGCAAAGTGCCTCTCAGATCTGAGCACTGGGAGACAGCCGTCATTGTGGGAAGAGTTGGCTGATTGTGATACAAATGTCTCACTTGTCTTCGGAGAGAAAGATGTAAAATTCAAGAAAATTGCTAGTAGGATGTACCTTGAGATGAGTAAAAGCAAGAAGAGCGAAATCCATATCATTGAGACGGTTGAAATCCCAGAAGCTGGCCACGCTGTTCATCTGGAGAGCCCTCTCCACTTGATCCTCGCTCTTAGAAAGTTCTTAACAAGAGTGCGCAAAAACTCTGCAGAGACAGAGCTTTCGCAGAAGCTCTTGTTAGCACTTAAAGAAACATAA
Protein:  
MVTAYGFPDIDFNGNSSVYSKDGSSYFFVPQVELDEHEEVSILAVTLAWNDSLSYSFEQAISSYEKSIFQVSCHVCPNLEEHWFKNLKSSLAKLDVKEIHPIKMEHMEYLTFSGRDQGDAKELKNIQPLCQFHCKLSPDVVFSNNMLNQEAEVSNSLKDQANINAVWASAIIEECTRLGLTYFCVAPGSRSSHLAIAAANHPLTTCLACYDERSLAFHAIGYAKGSLKPAVIITSSGTAVSNLLPAVVEASEDFLPLLLLTADRPPELQGVGANQAINQINHFGSFVRFFFNLPPPTDLIPVRMVLTTIDSALHWATGSACGPVHMNCPFRDPLDGSPTNWSFNCLNGLDMWMSNSEPFTKYFQVQSLKSNGETTGQITEVLQVIKEAKKGLLLIGAIHTEDEIWASLLLAKELMWPVVADVLSGVRLRKLSKPFLEKWTPIFVDHLDHALLSDSVKNLIEFDVVIQVGSRITSKRVSQVLEKCFPFAYILVDKHPCRHDPSHLVTHRVQSNIVQFADCVLKSRFPWRRSKLHGHLHALDGAIAREMSFQLSAECSLTEPYVAHMLSKALTSKSALFIGNSMPIRDVDMYGCSSGNYSHVVDMMLSAELPSQWIQVTGNRGASGIDGLLSSATGFAVGCKKRVVCVVGDVSFLHDTNGLAILKQRTARKAMTVLVINNRGGGIFRLLPIAKRTEPSVLNQYFYTSHDISIENLCLAHGVKYVHVGTKRELEETLLEPSVEEMDCIVEVESSIDANAIVHSTLESFARQAANNSLGIISASSVLHPMIDSVLLFQVSGIQYSRYRVGLCDRPTIYSGESSQFHREGFILSLTLEDGSIGCGEVAPLDSSRENLMDVEGQLQLILHLMKGAKVSHMLPLLNGSFSSWIWSELGITASSVFPSVRCGLEMALLNAMAVKHDSGLMGILHCQKEENGSAQPHSVPICALLDSEGTPSEVAYVARKLVEEGFSAIKLKVARRVNSVQDALVLQEVRRLVGDQIELRVDANCRWTFEEAITFGLLVKKCNLQYIEEPVQNKDDLIRFCEESGLPVALDETLDDFKECPLRMLAKYTHPGVVAVVIKPSVVGGFEIAALIARWAQQHGKMAVISAAYESGLGLSAYILFASYLETENVKTFRERKQGMAPLVAHGLGTYKWLNEDVMMNSLGISRSPYSGFIEGSVADASKNLKDVNINNDVIVRTSIGVLVRRCELRVDVGGFSHFVRIHEVGQNVEGSVVMFLHGFLGTGEEWIPIMKGISGSARCISVDIPGHGSSRVQSNASETPTFSMEMIAEALYKLIEQITPGKVTIVGYSMGARIALYMALRFSNKIEGAVVVSGSPGIKDPVARKVRSATDDSKARMMVDHGLEIFVENWYNGGLWKSFRSHPHFRKIVASRLVHDDVLSVAKCLSDLSTGRQPSLWEELADCDTNVSLVFGEKDVKFKKIASRMYLEMSKSKKSEIHIIETVEIPEAGHAVHLESPLHLILALRKFLTRVRKNSAETELSQKLLLALKET